Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7309

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7308: 15676 - Hypothetical Protein, at 1360588 to 1362752 15676 mRNA_7309: 15677 - KOG0803 Predicted E3 ubiquitin ligase, at 1363408 to 1369017 15677

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,362,992 - -0.4
1,363,018 + 1.2
1,363,187 - 1.2
1,363,317 + 0.7
1,363,361 + 0.6
1,363,381 - -1.0
1,363,432 - -0.3
1,363,488 + 0.7
1,363,499 - 1.8
1,363,519 + -1.3
1,363,757 + -0.5
1,363,771 + 1.0
1,363,778 + 0.9
1,363,879 + -0.4
1,363,916 + 0.4
1,364,041 - 15677 mRNA_7309 0.11 -0.2
1,364,091 - 15677 mRNA_7309 0.12 -0.2
1,364,098 + 15677 mRNA_7309 0.12 -0.1
1,364,192 + 15677 mRNA_7309 0.14 0.0
1,364,348 + 15677 mRNA_7309 0.17 1.3
1,364,465 - 15677 mRNA_7309 0.19 0.5
1,365,155 + 15677 mRNA_7309 0.31 -0.6
1,365,376 - 15677 mRNA_7309 0.35 -0.5
1,365,376 - 15677 mRNA_7309 0.35 0.7
1,365,384 - 15677 mRNA_7309 0.35 -0.6
1,366,008 - 15677 mRNA_7309 0.46 1.1
1,366,096 - 15677 mRNA_7309 0.48 -0.5
1,366,177 - 15677 mRNA_7309 0.49 -1.3
1,366,350 + 15677 mRNA_7309 0.52 0.2
1,366,516 + 15677 mRNA_7309 0.55 2.1
1,366,729 + 15677 mRNA_7309 0.59 1.3
1,366,833 - 15677 mRNA_7309 0.61 -0.0
1,367,057 - 15677 mRNA_7309 0.65 0.6
1,367,632 + 15677 mRNA_7309 0.75 -0.2
1,367,632 + 15677 mRNA_7309 0.75 -2.3
1,367,632 + 15677 mRNA_7309 0.75 1.8
1,367,636 + 15677 mRNA_7309 0.75 -0.1
1,367,758 + 15677 mRNA_7309 0.78 -0.5
1,367,759 - 15677 mRNA_7309 0.78 -2.6
1,367,768 + 15677 mRNA_7309 0.78 0.5
1,367,834 + 15677 mRNA_7309 0.79 0.3
1,367,854 + 15677 mRNA_7309 0.79 -0.3
1,367,875 + 15677 mRNA_7309 0.80 0.5
1,368,525 + 0.5
1,368,597 + 0.2
1,368,925 - 1.8
1,368,931 + 0.5
1,368,936 + 0.5