Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7286

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7285: 15653 - HMMPfam-GPR1/FUN34/yaaH family-PF01184,ProSitePatterns-GPR1/FUN34/yaaH family signature.-PS01114, at 1296567 to 1298156 15653 mRNA_7286: 15654 - K17508 PTC7, PPTC7 protein phosphatase PTC7, at 1298455 to 1300194 15654 mRNA_7287: 15655 - KOG1650 Predicted K+/H+-antiporter, at 1300523 to 1304371 15655

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,297,553 - 15653 mRNA_7285 0.62 0.5
1,297,829 - 15653 mRNA_7285 0.79 -0.5
1,297,837 - 15653 mRNA_7285 0.80 1.3
1,297,882 - 15653 mRNA_7285 0.83 -2.9
1,298,142 - -0.7
1,298,168 - -0.0
1,298,178 - -0.0
1,298,760 + 15654 mRNA_7286 0.18 0.2
1,298,891 - 15654 mRNA_7286 0.25 -0.7
1,299,217 - 15654 mRNA_7286 0.44 -0.2
1,299,326 + 15654 mRNA_7286 0.50 2.3
1,299,656 - 15654 mRNA_7286 0.69 -1.1
1,299,669 - 15654 mRNA_7286 0.70 0.3
1,299,771 - 15654 mRNA_7286 0.76 -0.8
1,299,943 - 15654 mRNA_7286 0.86 0.6
1,300,039 - 0.5
1,300,063 + 0.4
1,300,083 - 0.9
1,300,098 - 0.2
1,300,212 + 0.3
1,300,239 - 1.3
1,300,394 + -1.1
1,300,531 - 0.2
1,300,532 - 1.0
1,300,667 - 0.2
1,301,131 + 15655 mRNA_7287 0.16 -0.7
1,301,167 + 15655 mRNA_7287 0.17 -0.2
1,301,177 - 15655 mRNA_7287 0.17 -0.6