Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7107

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895700 to 897201 15474 mRNA_7107: 15475 - KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain, at 897416 to 899091 15475 mRNA_7108: 15476 - HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296, at 899228 to 903559 15476

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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896,481 - 15474 mRNA_7106 0.52 -0.4
896,628 - 15474 mRNA_7106 0.62 1.0
897,104 + 0.6
897,359 - -0.6
897,367 + 0.1
897,376 + -1.1
897,398 - 1.3
897,496 - -0.6
897,641 - 15475 mRNA_7107 0.13 -0.9
897,921 - 15475 mRNA_7107 0.30 -1.5
898,355 - 15475 mRNA_7107 0.56 0.0
898,923 - 15475 mRNA_7107 0.90 0.5
899,064 - 0.1
899,208 + -0.9
899,315 + 0.1
899,383 - 0.4
899,498 - 0.0
899,551 - -0.6
899,897 + 15476 mRNA_7108 0.15 -0.4
899,928 - 15476 mRNA_7108 0.16 0.2