Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7069

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7068: 15436 - K00167 BCKDHB, bkdA2 2-oxoisovalerate dehydrogenase E1 component beta subunit, at 804244 to 806337 15436 mRNA_7069: 15437 - HMMPfam-DNA-directed RNA polymerase III subunit Rpc31-PF11705, at 806497 to 812015 15437 mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812673 to 814209 15438

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
805,533 - 15436 mRNA_7068 0.62 -0.4
805,636 + 15436 mRNA_7068 0.66 -0.1
805,952 - 15436 mRNA_7068 0.82 0.3
806,083 - 15436 mRNA_7068 0.88 0.5
806,100 + 15436 mRNA_7068 0.89 1.6
806,227 - 1.4
806,526 + 1.0
806,680 - -0.3
806,892 - 1.6
806,996 - -0.9
807,111 - 15437 mRNA_7069 0.11 -0.7
807,155 - 15437 mRNA_7069 0.12 0.7
807,402 + 15437 mRNA_7069 0.16 -1.4
807,600 - 15437 mRNA_7069 0.20 1.6
807,601 + 15437 mRNA_7069 0.20 1.5
807,601 + 15437 mRNA_7069 0.20 -0.9
807,610 + 15437 mRNA_7069 0.20 -0.1
807,879 - 15437 mRNA_7069 0.25 0.6
808,173 + 15437 mRNA_7069 0.30 0.9
808,530 + 15437 mRNA_7069 0.37 0.7
808,533 - 15437 mRNA_7069 0.37 -0.4
808,540 + 15437 mRNA_7069 0.37 0.2
808,579 + 15437 mRNA_7069 0.38 0.7
808,674 + 15437 mRNA_7069 0.39 -0.1
808,741 + 15437 mRNA_7069 0.41 -0.6
808,858 + 15437 mRNA_7069 0.43 -0.9
808,990 - 15437 mRNA_7069 0.45 1.1
809,186 - 15437 mRNA_7069 0.49 -0.6
809,361 - 15437 mRNA_7069 0.52 0.0
809,747 - 15437 mRNA_7069 0.59 1.2
809,789 + 15437 mRNA_7069 0.60 1.8
809,796 - 15437 mRNA_7069 0.60 -0.0
809,892 - 15437 mRNA_7069 0.62 -0.1
810,092 - 15437 mRNA_7069 0.65 0.0
810,389 + 15437 mRNA_7069 0.71 0.6
810,502 + 15437 mRNA_7069 0.73 -0.5
810,639 + 15437 mRNA_7069 0.75 -0.9
810,650 - 15437 mRNA_7069 0.75 0.4
810,665 + 15437 mRNA_7069 0.76 -1.5
810,668 + 15437 mRNA_7069 0.76 -0.4
810,766 - 15437 mRNA_7069 0.77 0.3
810,769 + 15437 mRNA_7069 0.77 1.2
810,777 + 15437 mRNA_7069 0.78 -1.4
810,787 - 15437 mRNA_7069 0.78 0.4
810,790 + 15437 mRNA_7069 0.78 1.0
810,804 - 15437 mRNA_7069 0.78 -0.6
810,808 - 15437 mRNA_7069 0.78 -0.4
810,808 + 15437 mRNA_7069 0.78 -0.8
811,993 + -0.9
812,128 - 0.5
812,131 + 0.1
812,141 - 0.6
812,150 + 0.6
812,192 - 0.9
812,226 - 0.4
812,226 - 1.0
812,248 + 0.5
812,253 + -0.1
812,254 + 0.2
812,258 - -1.3
812,261 + -0.4
812,281 + 0.9
812,286 - 1.7
812,294 - -0.3
812,318 - -0.1
812,323 - 0.2
812,324 + 0.8
812,339 - 0.5
812,377 - -0.0
812,402 + 0.5
812,405 - -1.3
812,406 - 0.1
812,415 + -0.8
812,416 - 0.3
812,416 + 0.3
812,424 - 2.3
812,424 + 3.0
812,426 - -0.2
812,449 - -0.9
812,463 - -0.6
812,466 + -0.0
812,469 + 0.8
812,485 - 0.7
812,489 + -0.7
812,490 + 1.6
812,608 - -0.5
812,612 - -0.3
812,628 + 0.3
812,779 + -1.0