Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7038

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7037: 15405 - K08254 E3.2.1.59 glucan endo-1,3-alpha-glucosidase, at 722546 to 724803 15405 mRNA_7038: 15406 - K15458 SAP185_190 SIT4-associating protein SAP185/190, at 725352 to 729605 15406 mRNA_7039: 15407 - Hypothetical Protein, at 729956 to 731972 15407

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
724,514 - 15405 mRNA_7037 0.87 -0.7
724,780 + 0.8
724,793 - -0.3
725,147 + 0.4
725,267 - -0.5
725,286 - 0.9
725,427 + 0.5
725,516 - 0.7
725,803 - 15406 mRNA_7038 0.11 -0.4
725,847 + 15406 mRNA_7038 0.12 0.7
725,855 + 15406 mRNA_7038 0.12 -1.2
725,991 - 15406 mRNA_7038 0.15 -0.7
726,374 - 15406 mRNA_7038 0.24 -0.6
727,181 - 15406 mRNA_7038 0.43 0.7
727,298 + 15406 mRNA_7038 0.46 0.3
727,300 - 15406 mRNA_7038 0.46 -0.1
727,601 - 15406 mRNA_7038 0.53 -0.5
727,669 - 15406 mRNA_7038 0.54 -0.2
727,686 + 15406 mRNA_7038 0.55 0.6
728,491 + 15406 mRNA_7038 0.74 -0.2
728,568 + 15406 mRNA_7038 0.76 3.4
728,641 + 15406 mRNA_7038 0.77 0.4
728,924 + 15406 mRNA_7038 0.84 0.2
729,371 + -1.1
729,491 + 0.2
729,500 - 2.4
729,643 - 0.9
729,702 - 2.0
729,777 + -0.4
729,784 + 1.1
729,803 + 0.3
729,803 + 0.0
729,806 + 0.3
729,809 + 0.3
729,813 + -0.2
729,815 + 1.1
729,947 + -0.0
729,976 - -1.1
730,208 - 15407 mRNA_7039 0.12 -0.9
730,510 + 15407 mRNA_7039 0.27 1.2