Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6958

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6958: 15326 - K09238 ACE2 metallothionein expression activator, at 534004 to 536795 15326 mRNA_6959: 15327 - K14805 DDX24, MAK5 ATP-dependent RNA helicase DDX24/MAK5, at 537105 to 540222 15327

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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533,036 + 0.5
533,068 + -0.6
533,092 + 3.1
533,098 - 0.6
533,121 + 0.2
533,134 + -0.4
533,159 - -0.0
533,171 + -0.6
533,173 - -0.9
533,174 + 0.2
533,212 + 0.1
533,223 + 0.4
533,224 - 0.1
533,245 - 0.3
533,357 + 1.6
533,376 + -0.9
533,380 + 0.0
533,380 - -0.0
533,383 - 0.4
533,384 + 0.6
533,391 + 1.6
533,395 + -0.3
533,398 - -1.3
533,408 + 1.3
533,408 + 0.1
533,409 + -0.1
533,409 + 0.5
533,409 + -0.5
533,429 - 0.7
533,431 + 0.5
533,432 + 0.9
533,433 - 1.1
533,439 - -0.9
533,446 + 0.7
533,483 + 0.5
533,484 - 0.7
533,485 + 1.0
533,493 - 0.3
533,507 - -1.1
533,514 + 0.8
533,514 - 0.1
533,515 - 1.2
533,522 + 0.5
533,524 - 2.4
533,526 - 0.8
533,685 - 1.2
533,692 - 0.9
533,819 - 1.6
533,851 - 0.9
533,979 - 0.3
533,993 + -0.5
533,996 + 1.7
534,308 - 15326 mRNA_6958 0.11 1.5
534,589 + 15326 mRNA_6958 0.21 2.8
534,838 - 15326 mRNA_6958 0.30 1.4
535,147 - 15326 mRNA_6958 0.41 2.2
535,150 - 15326 mRNA_6958 0.41 1.3
535,167 + 15326 mRNA_6958 0.42 1.1
535,782 + 15326 mRNA_6958 0.64 0.6
536,049 + 15326 mRNA_6958 0.73 0.3
536,485 - 15326 mRNA_6958 0.89 2.3
536,644 - -0.2