Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6897

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6896: 15264 - KOG1399 Flavin-containing monooxygenase, at 380305 to 381908 15264 mRNA_6897: 15265 - Hypothetical Protein, at 382529 to 383336 15265 mRNA_6898: 15266 - HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,SUPERFAMILY--SSF52833, at 383747 to 384768 15266

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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381,603 + 15264 mRNA_6896 0.81 0.8
381,697 - 15264 mRNA_6896 0.87 0.7
381,702 - 15264 mRNA_6896 0.87 0.9
382,017 + 2.0
382,147 + 0.2
382,149 - -0.3
382,181 - 0.0
382,188 - 0.4
382,196 + 0.3
382,221 + -0.6
382,237 + 0.2
382,238 - 0.5
382,238 - -0.8
382,243 + -1.6
382,251 + -0.1
382,261 + 0.1
382,261 - -0.0
382,264 + -0.7
382,264 - 0.1
382,268 + 0.2
382,269 + -0.0
382,270 + 0.3
382,272 + -1.2
382,277 - 0.8
382,295 + -0.6
382,306 - 1.1
382,309 + -0.5
382,310 - -0.9
382,311 - -0.3
382,325 - 0.7
382,337 + -0.8
382,339 + 0.1
382,340 + 0.4
382,342 - -1.4
382,344 + 0.4
382,351 + 1.1
382,379 + -0.5
382,471 + 0.0
382,490 + 1.1
382,494 + -0.0
382,499 - 1.3
382,508 + -0.3
382,512 + -0.2
382,513 + 0.4
382,535 + 1.1
382,652 - 15265 mRNA_6897 0.15 0.7
382,662 + 15265 mRNA_6897 0.16 -1.6
382,662 + 15265 mRNA_6897 0.16 -0.3
382,769 - 15265 mRNA_6897 0.30 0.2
382,954 + 15265 mRNA_6897 0.53 -2.1
383,044 + 15265 mRNA_6897 0.64 0.2
383,056 - 15265 mRNA_6897 0.65 -0.4
383,080 + 15265 mRNA_6897 0.68 1.9
383,192 - 15265 mRNA_6897 0.82 -0.1
383,327 + 1.1
383,332 - 0.8
383,361 - 0.1
383,398 - -0.6
383,508 - 0.4
383,632 - -0.9
383,636 + 0.0
383,644 + 0.2
383,937 + 15266 mRNA_6898 0.19 -0.7
383,951 - 15266 mRNA_6898 0.20 0.5
383,964 - 15266 mRNA_6898 0.21 0.2
384,097 + 15266 mRNA_6898 0.34 1.3
384,250 + 15266 mRNA_6898 0.49 -0.4
384,255 - 15266 mRNA_6898 0.50 0.3
384,269 + 15266 mRNA_6898 0.51 -0.5