Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6864

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6862: 15230 - KOG0754 Mitochondrial oxodicarboxylate carrier protein, at 303833 to 305130 15230 mRNA_6863: 15231 - HMMPfam-Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like-PF05365,SUPERFAMILY--SSF81514, at 305544 to 305791 15231 mRNA_6864: 15232 - K18416 THEX1, ERI1 3'-5' exoribonuclease 1, at 305954 to 308144 15232 mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308236 to 309069 15233

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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305,036 - 0.2
305,038 - -1.5
305,225 + 0.9
305,235 - 1.1
305,342 - -0.0
305,350 + 1.3
305,374 - 0.4
305,463 - -0.7
306,223 + 15232 mRNA_6864 0.12 -1.6
306,243 - 15232 mRNA_6864 0.13 -0.4
306,250 + 15232 mRNA_6864 0.14 1.2
306,372 + 15232 mRNA_6864 0.19 0.5
306,396 - 15232 mRNA_6864 0.20 0.0
306,412 - 15232 mRNA_6864 0.21 -0.0
306,660 + 15232 mRNA_6864 0.32 0.1
306,687 - 15232 mRNA_6864 0.33 -0.3
306,694 + 15232 mRNA_6864 0.34 -1.0
306,764 - 15232 mRNA_6864 0.37 -0.0
306,950 - 15232 mRNA_6864 0.45 -0.1
306,959 + 15232 mRNA_6864 0.46 -0.1
306,969 - 15232 mRNA_6864 0.46 -0.1
307,105 - 15232 mRNA_6864 0.53 0.1
307,115 + 15232 mRNA_6864 0.53 1.3
307,116 - 15232 mRNA_6864 0.53 -0.3
307,408 - 15232 mRNA_6864 0.66 1.3
307,416 - 15232 mRNA_6864 0.67 -0.9
307,536 - 15232 mRNA_6864 0.72 -0.2
307,575 - 15232 mRNA_6864 0.74 0.1
307,701 + 15232 mRNA_6864 0.80 0.7
307,702 + 15232 mRNA_6864 0.80 -2.1
307,975 - -0.8
307,993 - -0.1
307,998 - -1.1
308,002 + 1.8
308,003 + -0.3
309,141 - -1.3