Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6858

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6857: 15225 - Hypothetical Protein, at 292496 to 294098 15225 mRNA_6858: 15226 - SUPERFAMILY--SSF103473, at 295033 to 296248 15226 mRNA_6859: 15227 - K16794 PAFAH1B1, LIS1 platelet-activating factor acetylhydrolase IB subunit alpha, at 297202 to 298993 15227

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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294,097 - 0.7
294,166 + -0.8
294,374 + -0.1
294,742 + 2.8
294,850 + 0.3
294,888 - 0.1
294,894 + -0.6
294,919 + 0.1
295,088 + -0.1
295,120 - 0.3
295,267 - 15226 mRNA_6858 0.19 0.7
295,299 + 15226 mRNA_6858 0.22 -0.5
295,403 - 15226 mRNA_6858 0.30 -0.6
295,556 - 15226 mRNA_6858 0.43 1.9
295,588 + 15226 mRNA_6858 0.46 2.3
296,427 - -1.1
296,428 - -0.5
296,432 + -0.3
296,561 - -1.4
296,687 - 0.4
296,829 - 0.6
296,855 - 0.7
296,870 - -0.3
296,881 - -0.1
296,889 - -1.0
296,889 + 0.7
296,889 + 0.0
296,891 - 0.2
296,898 + 1.4
297,034 - 0.8