Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6839

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6838: 15206 - K17656 MSS51 mitochondrial splicing suppressor protein 51, at 240941 to 242492 15206 mRNA_6839: 15207 - K17257 ITFG1 integrin alpha FG-GAP repeat containing protein 1, at 242700 to 245129 15207 mRNA_6840: 15208 - SUPERFAMILY--SSF81383, at 245238 to 247225 15208

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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242,589 - -0.8
242,595 + -1.8
242,611 + 1.3
242,701 + 0.5
242,701 + 1.8
242,725 - 0.8
242,725 - 1.5
242,728 + -1.2
242,928 - 0.7
243,055 + 15207 mRNA_6839 0.15 2.1
243,154 - 15207 mRNA_6839 0.19 1.1
244,063 + 15207 mRNA_6839 0.56 0.7
244,063 - 15207 mRNA_6839 0.56 1.8
244,228 + 15207 mRNA_6839 0.63 1.0
244,419 - 15207 mRNA_6839 0.71 0.5
244,481 - 15207 mRNA_6839 0.73 0.4
244,492 + 15207 mRNA_6839 0.74 0.7
244,504 + 15207 mRNA_6839 0.74 2.3
244,514 + 15207 mRNA_6839 0.75 0.8
244,514 + 15207 mRNA_6839 0.75 1.0
244,518 + 15207 mRNA_6839 0.75 1.2
244,550 - 15207 mRNA_6839 0.76 1.9
244,645 - 15207 mRNA_6839 0.80 0.8
244,804 + 15207 mRNA_6839 0.87 2.6
244,822 + 15207 mRNA_6839 0.87 1.2
244,904 - 1.0
245,060 + 0.7
245,105 + -0.6
245,364 - -0.5
245,434 - 1.0
245,778 + 15208 mRNA_6840 0.27 -0.4
246,100 + 15208 mRNA_6840 0.43 -0.3