Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6805

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6804: 15172 - HMMPfam-CFEM domain-PF05730, at 173731 to 174873 15172 mRNA_6805: 15173 - Hypothetical Protein, at 174992 to 176183 15173 mRNA_6806: 15174 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 176839 to 177908 15174

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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174,101 + 15172 mRNA_6804 0.32 0.4
174,342 - 15172 mRNA_6804 0.53 -0.1
174,637 + 15172 mRNA_6804 0.79 -0.5
174,640 - 15172 mRNA_6804 0.80 0.5
174,658 + 15172 mRNA_6804 0.81 -0.2
174,749 + 15172 mRNA_6804 0.89 -0.0
174,755 + 15172 mRNA_6804 0.90 0.5
175,006 + 0.1
175,139 + 15173 mRNA_6805 0.12 0.3
175,378 + 15173 mRNA_6805 0.32 0.9
175,381 - 15173 mRNA_6805 0.33 1.0
175,460 + 15173 mRNA_6805 0.39 -0.7
175,841 + 15173 mRNA_6805 0.71 0.6
176,378 + -0.3
176,383 + -0.3
176,413 + -0.7
176,416 - -1.2