Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6593

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6592: 14960 - KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases), at 1177177 to 1181389 14960 mRNA_6593: 14961 - KOG1616 Protein involved in Snf1 protein kinase complex assembly, at 1181934 to 1184760 14961 mRNA_6594: 14962 - Hypothetical Protein, at 1185116 to 1185583 14962

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,181,418 + -0.7
1,181,529 + -0.4
1,181,571 + -0.4
1,181,653 - -0.1
1,181,693 + -0.2
1,181,699 - 1.3
1,181,708 + 0.3
1,182,489 - 14961 mRNA_6593 0.20 0.8
1,182,911 - 14961 mRNA_6593 0.35 2.3
1,182,984 - 14961 mRNA_6593 0.37 -0.1
1,183,076 + 14961 mRNA_6593 0.40 -0.1
1,183,076 - 14961 mRNA_6593 0.40 1.1
1,183,187 + 14961 mRNA_6593 0.44 1.8
1,183,222 - 14961 mRNA_6593 0.46 1.6
1,183,329 + 14961 mRNA_6593 0.49 1.8
1,183,340 + 14961 mRNA_6593 0.50 1.5
1,183,348 + 14961 mRNA_6593 0.50 0.9
1,183,389 - 14961 mRNA_6593 0.51 0.2
1,183,632 - 14961 mRNA_6593 0.60 0.4
1,183,634 + 14961 mRNA_6593 0.60 0.5
1,183,779 + 14961 mRNA_6593 0.65 1.4
1,183,798 + 14961 mRNA_6593 0.66 -0.3
1,184,088 + 14961 mRNA_6593 0.76 1.7
1,184,216 + 14961 mRNA_6593 0.81 0.5
1,184,324 - 14961 mRNA_6593 0.85 0.6
1,184,360 - 14961 mRNA_6593 0.86 0.7
1,184,496 + 1.6
1,184,497 + -2.0
1,184,672 + 0.8
1,184,673 - 0.9
1,184,686 + -0.3
1,184,688 + 1.4
1,184,805 - -2.0
1,184,810 - 0.4
1,184,829 + 1.8
1,184,834 - 0.3
1,184,835 - -0.6
1,184,838 + 0.8
1,184,841 - 0.4
1,185,131 + 0.7
1,185,134 + -2.0
1,185,149 + 0.7
1,185,258 - 14962 mRNA_6594 0.30 -0.2