Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6535

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6535: 14903 - KOG0715 Molecular chaperone (DnaJ superfamily), at 1022471 to 1023493 14903 mRNA_6536: 14904 - HMMPfam-Protein of unknown function (DUF837)-PF05769, at 1023887 to 1025304 14904

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,021,479 - 0.2
1,021,492 - -0.1
1,021,496 - 1.0
1,021,502 - -1.2
1,021,507 + -0.1
1,021,515 + -0.6
1,021,796 - 0.4
1,021,912 - -1.7
1,021,948 + -1.7
1,021,952 - -1.0
1,022,080 + -2.3
1,022,087 + -1.4
1,022,087 + 0.1
1,022,350 - 0.9
1,022,365 - 1.9
1,022,371 - 1.1
1,022,377 - -0.3
1,022,402 + -0.7
1,022,529 - 0.6
1,022,534 + 1.0
1,022,534 + 0.3
1,022,675 + 14903 mRNA_6535 0.20 -0.9
1,022,680 - 14903 mRNA_6535 0.20 1.9
1,022,810 - 14903 mRNA_6535 0.33 2.4
1,023,115 - 14903 mRNA_6535 0.63 -0.1
1,023,260 - 14903 mRNA_6535 0.77 0.1
1,023,547 + 2.4
1,023,568 + 0.3
1,023,670 - 1.2
1,023,691 + 0.6
1,023,697 - -1.4
1,023,699 - 0.2
1,023,725 + 0.7
1,023,800 - 0.8
1,023,849 - 0.5
1,023,865 + 1.3
1,023,868 + 0.9
1,023,884 + 0.9
1,024,198 + 14904 mRNA_6536 0.22 1.4