Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6422

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6420: 14788 - K14263 BNA7 kynurenine formamidase, at 764043 to 765055 14788 mRNA_6421: 14789 - SUPERFAMILY--SSF82199, at 765271 to 766029 14789 mRNA_6422: 14790 - KOG2084 Predicted histone tail methylase containing SET domain, at 766030 to 767975 14790 mRNA_6423: 14791 - Hypothetical Protein, at 768388 to 769029 14791

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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765,047 - 2.6
765,100 - 0.1
765,101 - 0.9
765,124 - 1.3
765,129 + 1.4
765,131 - -0.2
765,132 - -0.1
765,141 - -0.4
765,155 + -2.4
765,251 + 2.0
765,289 + 0.2
765,402 - 14789 mRNA_6421 0.17 0.0
765,561 - 14789 mRNA_6421 0.38 -0.5
765,684 + 14789 mRNA_6421 0.54 0.3
765,722 + 14789 mRNA_6421 0.59 -0.2
766,229 - 14790 mRNA_6422 0.10 -2.2
766,555 - 14790 mRNA_6422 0.27 -0.5
766,659 + 14790 mRNA_6422 0.32 0.2
766,878 + 14790 mRNA_6422 0.44 -0.3
767,143 + 14790 mRNA_6422 0.57 -0.9
767,163 + 14790 mRNA_6422 0.58 -0.1
767,234 - 14790 mRNA_6422 0.62 0.8
767,323 + 14790 mRNA_6422 0.66 0.7
767,352 + 14790 mRNA_6422 0.68 -2.1
767,355 - 14790 mRNA_6422 0.68 -1.3
767,469 + 14790 mRNA_6422 0.74 2.2
767,555 - 14790 mRNA_6422 0.78 0.4
767,708 - 14790 mRNA_6422 0.86 -0.7
767,862 + -0.1
767,863 + -0.9
767,872 + 0.3
768,001 + 0.1
768,116 + 0.2
768,297 + 0.4
768,306 - 1.1
768,312 + 0.7
768,366 + -0.2
768,595 + 14791 mRNA_6423 0.32 1.3