Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6335

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6334: 14702 - Hypothetical Protein, at 573693 to 575624 14702 mRNA_6335: 14703 - BLAST chloride channel protein 3 [Pseudozyma hubeiensis..., at 576114 to 577521 14703 mRNA_6336: 14704 - K14773 UTP23 U3 small nucleolar RNA-associated protein 23, at 577858 to 579187 14704

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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575,144 - 14702 mRNA_6334 0.75 1.7
575,255 + 14702 mRNA_6334 0.81 0.6
575,390 + 14702 mRNA_6334 0.88 1.0
575,565 - 0.2
575,679 - 0.4
575,708 - -1.5
575,858 + -1.3
575,991 - -0.6
575,997 - -0.2
576,262 - 14703 mRNA_6335 0.11 -1.6
576,595 - 14703 mRNA_6335 0.34 0.7
576,650 - 14703 mRNA_6335 0.38 0.5
576,735 - 14703 mRNA_6335 0.44 -0.2
576,743 + 14703 mRNA_6335 0.45 -0.7
576,889 - 14703 mRNA_6335 0.55 -1.0
576,909 - 14703 mRNA_6335 0.56 0.1
576,915 + 14703 mRNA_6335 0.57 -0.2
577,141 - 14703 mRNA_6335 0.73 0.5
577,458 - 0.5
577,466 + 0.9
577,485 - 0.2
577,617 - 0.0
577,622 - -2.3
577,755 - 0.7
577,762 - -0.1
577,762 - 0.1
577,762 - -1.0
577,765 + -0.0
577,768 - 1.1