Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6084

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6083: 14451 - Hypothetical Protein, at 1607969 to 1610179 14451 mRNA_6084: 14452 - SUPERFAMILY--SSF54427, at 1610344 to 1611077 14452 mRNA_6085: 14453 - HMMPfam-Heparinase II/III-like protein-PF07940,SUPERFAMILY--SSF48230, at 1611755 to 1615148 14453

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,609,385 - 14451 mRNA_6083 0.64 0.4
1,609,638 - 14451 mRNA_6083 0.75 -1.0
1,609,780 - 14451 mRNA_6083 0.82 0.2
1,609,900 + 14451 mRNA_6083 0.87 0.1
1,610,063 - 2.1
1,610,195 - 0.7
1,610,205 + -0.3
1,610,228 - -0.7
1,610,249 + 0.7
1,610,256 + -0.6
1,610,284 + 0.6
1,610,365 - -0.1
1,610,366 + -0.1
1,610,484 - 14452 mRNA_6084 0.19 0.1
1,610,667 + 14452 mRNA_6084 0.44 0.0
1,610,677 + 14452 mRNA_6084 0.45 -0.8
1,610,685 + 14452 mRNA_6084 0.46 -0.4
1,610,704 + 14452 mRNA_6084 0.49 0.9
1,610,721 - 14452 mRNA_6084 0.51 0.2
1,610,725 + 14452 mRNA_6084 0.52 -1.6
1,611,124 + -0.6
1,611,560 + 0.8
1,611,567 - 0.4
1,611,568 + 0.3
1,611,568 + -0.1
1,611,597 + -0.3
1,611,599 + 1.2
1,611,608 + 0.9
1,611,621 - 0.9
1,611,685 + 0.3
1,611,685 - -0.2
1,611,688 + 1.3
1,611,689 + 0.4
1,611,690 - 0.5
1,611,695 - -0.1
1,611,697 - 1.6
1,611,851 + 0.8
1,611,855 - -0.5
1,611,858 + 0.3
1,611,860 - -0.1
1,611,862 - 0.1
1,611,988 + 0.4
1,611,995 + 0.9