Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6062

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6061: 14429 - KOG3772 M-phase inducer phosphatase, at 1548729 to 1549422 14429 mRNA_6062: 14430 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 1549948 to 1551724 14430 mRNA_6063: 14431 - KOG0519 Sensory transduction histidine kinase, at 1552010 to 1556333 14431

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,549,021 + 14429 mRNA_6061 0.42 0.6
1,549,245 + 14429 mRNA_6061 0.74 -0.7
1,549,546 + 0.1
1,549,707 + 0.2
1,549,711 + 0.2
1,549,888 - -0.3
1,549,892 - 0.0
1,550,044 - 0.4
1,550,618 - 14430 mRNA_6062 0.38 0.4
1,550,755 + 14430 mRNA_6062 0.45 -0.2
1,550,893 + 14430 mRNA_6062 0.53 -0.4
1,550,904 - 14430 mRNA_6062 0.54 -0.4
1,551,481 + 14430 mRNA_6062 0.86 1.1
1,551,502 - 14430 mRNA_6062 0.87 0.9
1,551,610 - 1.2
1,551,633 - 0.6
1,551,641 + -0.2
1,551,651 + 0.1
1,551,652 - -0.5
1,551,792 - 0.5
1,551,800 - -0.0
1,551,806 - 0.9
1,551,812 - -0.8
1,551,933 - 0.5
1,551,948 - 0.2
1,551,953 - -0.0
1,551,964 + -1.0
1,551,965 + 1.9
1,551,965 + 0.8
1,552,019 - -0.5
1,552,024 - 0.1
1,552,025 + 2.1
1,552,026 - 0.6
1,552,031 - 0.9
1,552,031 - -1.9
1,552,035 - -0.0
1,552,035 + 0.5
1,552,036 - 1.3
1,552,036 + 0.9
1,552,040 - 1.4
1,552,040 + 0.2
1,552,043 + -0.6
1,552,043 - -3.0
1,552,045 + 1.4
1,552,057 + -0.3
1,552,125 - 1.1
1,552,193 - 0.5
1,552,199 + -0.8
1,552,200 + 0.4