Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6010

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6009: 14377 - K13939 FOL1 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase, at 1442140 to 1444838 14377 mRNA_6010: 14378 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF103473, at 1444950 to 1447121 14378 mRNA_6011: 14379 - HMMPfam-F-box-like-PF12937, at 1447630 to 1450531 14379

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
1,444,862 - 1.0
1,444,874 + -0.1
1,444,904 + 0.5
1,444,908 - 1.5
1,445,049 + 0.2
1,445,049 - -2.2
1,445,064 + 0.2
1,445,065 + -0.0
1,445,066 + 0.9
1,445,354 + 14378 mRNA_6010 0.19 -1.3
1,445,365 - 14378 mRNA_6010 0.19 0.4
1,445,788 - 14378 mRNA_6010 0.39 -1.2
1,445,924 + 14378 mRNA_6010 0.45 0.8
1,446,143 + 14378 mRNA_6010 0.55 -0.6
1,446,649 + 14378 mRNA_6010 0.78 2.2
1,446,843 - 14378 mRNA_6010 0.87 -1.6
1,446,959 + 0.1
1,447,095 - 2.9
1,447,237 - 0.7
1,447,240 + -0.0
1,447,245 + 0.2
1,447,253 - 0.5
1,447,258 + 0.8
1,447,307 - 0.5
1,447,311 + -0.5
1,447,316 + -0.9
1,447,555 + 0.3
1,447,560 + -0.8
1,447,577 + 0.1
1,447,735 - -0.7
1,447,737 + 0.7
1,448,042 + 14379 mRNA_6011 0.14 -0.1