Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5988

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5987: 14355 - HMMPfam-F-box-like-PF12937, at 1385071 to 1386352 14355 mRNA_5988: 14356 - K06111 EXOC4, SEC8 exocyst complex component 4, at 1386489 to 1391232 14356

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
1,385,518 - 14355 mRNA_5987 0.35 -0.9
1,385,568 + 14355 mRNA_5987 0.39 0.6
1,385,580 - 14355 mRNA_5987 0.40 0.2
1,385,622 + 14355 mRNA_5987 0.43 -0.7
1,385,640 - 14355 mRNA_5987 0.44 -0.9
1,385,718 + 14355 mRNA_5987 0.50 1.8
1,385,761 + 14355 mRNA_5987 0.54 -0.1
1,385,766 + 14355 mRNA_5987 0.54 -1.4
1,385,810 + 14355 mRNA_5987 0.58 -1.5
1,385,907 + 14355 mRNA_5987 0.65 1.1
1,385,910 - 14355 mRNA_5987 0.65 0.2
1,386,060 - 14355 mRNA_5987 0.77 -1.8
1,386,077 + 14355 mRNA_5987 0.78 0.3
1,386,089 - 14355 mRNA_5987 0.79 0.4
1,386,095 - 14355 mRNA_5987 0.80 0.3
1,386,103 - 14355 mRNA_5987 0.80 -0.8
1,386,202 + 14355 mRNA_5987 0.88 0.2
1,386,314 + 0.8
1,386,563 - -0.8
1,386,630 - -0.5
1,386,730 + -1.2
1,386,747 + 0.7
1,386,783 - 0.9
1,386,930 + 0.6
1,386,980 - 14356 mRNA_5988 0.10 0.7
1,387,021 + 14356 mRNA_5988 0.11 1.1
1,387,107 + 14356 mRNA_5988 0.13 0.2
1,387,213 - 14356 mRNA_5988 0.15 1.1
1,387,231 + 14356 mRNA_5988 0.16 1.7
1,387,238 + 14356 mRNA_5988 0.16 1.0
1,387,774 + 14356 mRNA_5988 0.27 1.0
1,387,842 + 14356 mRNA_5988 0.29 -0.3
1,387,844 + 14356 mRNA_5988 0.29 0.8
1,387,845 - 14356 mRNA_5988 0.29 1.8
1,387,855 - 14356 mRNA_5988 0.29 0.6
1,387,991 + 14356 mRNA_5988 0.32 0.6
1,387,992 - 14356 mRNA_5988 0.32 0.1
1,388,065 + 14356 mRNA_5988 0.33 2.1
1,388,167 - 14356 mRNA_5988 0.35 1.7
1,388,366 + 14356 mRNA_5988 0.40 0.5
1,388,526 + 14356 mRNA_5988 0.43 1.9
1,388,600 + 14356 mRNA_5988 0.44 2.1
1,388,672 - 14356 mRNA_5988 0.46 1.3
1,388,680 - 14356 mRNA_5988 0.46 1.1
1,388,988 - 14356 mRNA_5988 0.53 -0.5
1,391,232 - -0.0
1,391,400 - 0.9
1,391,680 - 0.2
1,392,122 + -0.1
1,392,145 + -0.5