Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5978

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1365252 to 1367121 14345 mRNA_5978: 14346 - Hypothetical Protein, at 1367846 to 1369331 14346 mRNA_5979: 14347 - K12832 SF3B5, SF3B10 splicing factor 3B subunit 5, at 1369573 to 1370035 14347 mRNA_5980: 14348 - K12592 C1D, LRP1 exosome complex protein LRP1, at 1370321 to 1371409 14348

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,366,892 - 14345 mRNA_5977 0.88 0.1
1,366,896 - 14345 mRNA_5977 0.88 0.1
1,367,055 - 1.1
1,367,262 + 1.1
1,367,345 - -0.4
1,367,347 - -0.2
1,367,348 - -0.1
1,367,356 + 0.9
1,367,358 - 0.1
1,367,374 + -0.2
1,367,374 + -0.1
1,367,374 + 0.2
1,367,374 - 1.0
1,367,448 + -0.9
1,368,093 + 14346 mRNA_5978 0.17 -0.1
1,368,254 + 14346 mRNA_5978 0.27 1.0
1,370,230 - 0.7