Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5775

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5774: 14142 - K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126, at 918001 to 918584 14142 mRNA_5775: 14143 - Hypothetical Protein, at 918877 to 919776 14143 mRNA_5776: 14144 - HMMPfam-Phosphatidylinositol-specific phospholipase C, X domain-PF00388,ProSiteProfiles-Phosphatidylinositol-specific phospholipase X-box domain profile.-PS50007,SUPERFAMILY--SSF51695, at 920137 to 921765 14144

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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917,901 - -1.7
918,071 - 14142 mRNA_5774 0.12 1.4
918,359 + 14142 mRNA_5774 0.61 0.1
918,521 + 14142 mRNA_5774 0.89 0.0
918,612 - 0.2
918,770 + -0.5
918,784 - 1.7
918,791 + -0.2
919,057 - 14143 mRNA_5775 0.20 0.0
919,209 - 14143 mRNA_5775 0.37 0.9
919,486 - 14143 mRNA_5775 0.68 0.3
919,515 - 14143 mRNA_5775 0.71 1.2
919,646 - 14143 mRNA_5775 0.85 0.3
919,666 - 14143 mRNA_5775 0.88 1.6
919,726 - -0.5
919,767 - 0.1
919,951 + 1.1
919,973 - 2.2
919,973 - 1.8
919,988 - 0.4
919,997 + -0.3
919,998 - -0.4
920,004 + 0.5
920,013 + 0.6
920,030 + -0.4
920,043 - 0.1
920,069 + 0.6
920,131 + 0.3
920,315 + 14144 mRNA_5776 0.11 -0.2
920,407 - 14144 mRNA_5776 0.17 0.1
920,615 - 14144 mRNA_5776 0.29 2.1
920,616 + 14144 mRNA_5776 0.29 -0.3
920,637 + 14144 mRNA_5776 0.31 0.6