Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5755

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5755: 14123 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 868685 to 870428 14123 mRNA_5756: 14124 - HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 870782 to 872057 14124

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
867,691 - 0.9
867,713 + 0.4
867,722 + -0.5
867,727 - -0.9
867,731 + 0.6
867,741 - 0.2
867,741 - 0.2
867,742 + -1.6
867,742 + -0.8
867,745 + -0.4
867,746 + 1.0
867,749 + -0.4
867,750 - -1.2
867,762 - 1.2
867,766 - 1.9
867,769 + -0.0
867,880 + -1.2
867,906 + 0.9
868,162 + 2.4
868,173 - -0.2
868,203 + -0.5
868,617 + -0.8
868,777 + -0.4
868,793 + 1.6
868,796 - 0.1
868,921 + 14123 mRNA_5755 0.14 2.0
868,925 - 14123 mRNA_5755 0.14 1.2
868,927 + 14123 mRNA_5755 0.14 0.1
868,943 - 14123 mRNA_5755 0.15 1.8
868,959 + 14123 mRNA_5755 0.16 0.6
868,973 - 14123 mRNA_5755 0.17 1.3
869,086 + 14123 mRNA_5755 0.23 1.0
869,816 - 14123 mRNA_5755 0.65 -0.8
869,818 - 14123 mRNA_5755 0.65 -1.0
869,848 + 14123 mRNA_5755 0.67 0.7
869,983 - 14123 mRNA_5755 0.74 0.3
870,019 - 14123 mRNA_5755 0.76 1.1
870,246 - 14123 mRNA_5755 0.90 1.2
870,268 + 0.6
870,308 - 0.1
870,414 - 0.3
870,535 - 0.3
870,682 - -0.8
870,722 + 0.3
870,724 + 0.1
870,726 + 0.2
870,751 + 0.5
870,787 + 1.5
870,876 + 1.0
870,881 - 0.8
871,154 - 14124 mRNA_5756 0.29 -0.1