Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5698

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5697: 14065 - K14568 EMG1, NEP1 rRNA small subunit pseudouridine methyltransferase Nep1, at 712124 to 713421 14065 mRNA_5698: 14066 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 714233 to 715636 14066 mRNA_5699: 14067 - HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300, at 716086 to 718925 14067

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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713,433 + 0.1
713,539 + -0.8
713,702 - -0.8
713,823 - -0.2
713,825 - 1.1
713,838 + -0.2
713,998 + 0.7
714,007 - 0.0
714,013 + 0.8
714,016 - 1.2
714,016 - 1.2
714,017 + 0.7
714,195 + 1.4
714,450 - 14066 mRNA_5698 0.15 -0.3
714,496 + 14066 mRNA_5698 0.19 -0.6
715,684 - 0.2
715,920 - 0.1