Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5694

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5693: 14061 - KOG4186 Peroxisomal biogenesis protein (peroxin), at 704894 to 706050 14061 mRNA_5694: 14062 - HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF13883,SUPERFAMILY--SSF50475, at 706295 to 707436 14062 mRNA_5695: 14063 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 708061 to 710208 14063

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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705,309 - 14061 mRNA_5693 0.36 0.6
705,625 - 14061 mRNA_5693 0.63 -0.6
705,655 - 14061 mRNA_5693 0.66 -1.2
705,786 - 14061 mRNA_5693 0.77 0.3
705,788 + 14061 mRNA_5693 0.77 0.8
705,819 + 14061 mRNA_5693 0.80 0.3
706,022 + 1.7
706,083 + -0.7
706,209 - 2.3
706,213 - 0.3
706,221 - -0.2
706,222 + -1.0
706,244 + 0.2
706,256 - -0.4
706,260 - 1.0
706,262 + 1.7
706,392 + 1.1
706,404 + 0.6
706,422 + 14062 mRNA_5694 0.11 0.0
706,433 + 14062 mRNA_5694 0.12 1.1
706,435 + 14062 mRNA_5694 0.12 0.6
706,860 + 14062 mRNA_5694 0.49 -1.3
706,872 - 14062 mRNA_5694 0.51 1.0
707,415 + 0.4
707,464 - 2.6
707,560 + -0.0
707,595 - -0.5
707,622 - 1.0
707,724 - -0.3
707,893 - 0.4
707,896 - -0.4
707,927 + -0.4
708,042 - -1.2
708,216 - -1.9
708,266 - -0.8
708,352 + 14063 mRNA_5695 0.14 -0.1