Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5657

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5656: 14024 - HMMPfam-Universal stress protein family-PF00582,PRINTS-Universal stress protein signature-PR01438,SUPERFAMILY--SSF52402, at 615931 to 617472 14024 mRNA_5657: 14025 - SUPERFAMILY--SSF52047, at 617641 to 619056 14025 mRNA_5658: 14026 - SUPERFAMILY--SSF52047, at 619237 to 620685 14026

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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617,583 - 1.1
617,796 - 14025 mRNA_5657 0.11 -0.1
617,890 + 14025 mRNA_5657 0.18 1.3
618,044 - 14025 mRNA_5657 0.28 0.9
618,150 + 14025 mRNA_5657 0.36 0.3
618,206 + 14025 mRNA_5657 0.40 0.4
618,478 - 14025 mRNA_5657 0.59 1.2
618,528 + 14025 mRNA_5657 0.63 1.0
618,684 - 14025 mRNA_5657 0.74 0.6
618,772 - 14025 mRNA_5657 0.80 -0.4
618,817 + 14025 mRNA_5657 0.83 3.7
618,824 + 14025 mRNA_5657 0.84 -0.3
618,960 - 0.6
618,981 + 0.8
619,012 + 2.3
619,126 + -0.7
619,373 + 0.4
619,413 + 14026 mRNA_5658 0.12 0.6
619,863 - 14026 mRNA_5658 0.43 0.2
619,868 - 14026 mRNA_5658 0.44 -0.6
620,046 + 14026 mRNA_5658 0.56 1.5