Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5632

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5631: 13999 - KOG4197 FOG PPR repeat, at 552322 to 556680 13999 mRNA_5632: 14000 - Hypothetical Protein, at 557069 to 557641 14000 mRNA_5633: 14001 - K01679 E4.2.1.2B, fumC fumarate hydratase, class II, at 558284 to 560290 14001

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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556,438 - 1.1
556,528 - 2.2
556,568 + -0.6
556,658 - 0.6
556,685 + 2.0
556,831 - 0.1
556,949 + 0.2
557,273 - 14000 mRNA_5632 0.36 0.6
557,280 - 14000 mRNA_5632 0.37 2.1
557,288 + 14000 mRNA_5632 0.38 1.5
557,293 + 14000 mRNA_5632 0.39 1.6
557,293 + 14000 mRNA_5632 0.39 0.5
557,300 + 14000 mRNA_5632 0.40 -0.0
557,419 + 14000 mRNA_5632 0.61 -0.8
557,437 + 14000 mRNA_5632 0.64 0.3
557,446 + 14000 mRNA_5632 0.66 -0.0
557,704 + 1.3
557,739 - -0.3
557,742 + 2.3
557,870 - 1.0
557,882 - 0.6
557,886 - -0.6
557,892 - 1.7
558,052 - 1.1
558,073 - -0.0
558,076 - -0.0
558,180 - 1.9
558,195 - 0.6
558,195 - -1.0
558,199 + -0.3
558,200 - 0.5