Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5591

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458129 to 461343 13959 mRNA_5592: 13960 - HMMPfam-Alcohol acetyltransferase-PF07247,SUPERFAMILY--SSF52777, at 461599 to 463064 13960

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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457,260 + 0.2
457,327 + 0.9
457,332 + -0.6
457,442 - 0.7
457,454 - 0.6
457,465 + -0.2
457,468 + -0.1
457,596 + -0.3
457,642 + 1.6
457,706 + 1.4
457,757 - 1.9
457,909 - 0.1
457,998 - 1.2
458,023 + -0.1
458,024 - 0.6
458,051 - 1.3
458,055 - -1.5
458,058 + 2.0
459,071 - 13959 mRNA_5591 0.29 1.1
459,203 + 13959 mRNA_5591 0.33 -1.4
459,203 + 13959 mRNA_5591 0.33 1.3
459,226 + 13959 mRNA_5591 0.34 -3.3
459,335 - 13959 mRNA_5591 0.38 0.5
459,384 + 13959 mRNA_5591 0.39 -1.1
459,390 - 13959 mRNA_5591 0.39 -0.3
459,777 - 13959 mRNA_5591 0.51 1.0
459,795 + 13959 mRNA_5591 0.52 0.7
460,080 - 13959 mRNA_5591 0.61 -0.3
460,085 + 13959 mRNA_5591 0.61 0.4
460,492 - 13959 mRNA_5591 0.73 -0.4
460,521 - 13959 mRNA_5591 0.74 1.0
460,954 - 13959 mRNA_5591 0.88 0.8
461,214 - 0.9
461,232 - 0.5
461,497 + -2.4
461,497 + -1.4
461,562 - -0.0
461,686 - -1.7
461,697 - -1.6
461,953 - 13960 mRNA_5592 0.24 -1.0
462,286 - 13960 mRNA_5592 0.47 0.9
462,330 + 13960 mRNA_5592 0.50 -2.6