Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5482

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199332 to 200672 13849 mRNA_5482: 13850 - Hypothetical Protein, at 201045 to 202061 13850 mRNA_5483: 13851 - KOG1339 Aspartyl protease, at 202681 to 205111 13851

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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200,071 - 13849 mRNA_5481 0.55 1.0
200,156 + 13849 mRNA_5481 0.61 -0.6
200,237 - 13849 mRNA_5481 0.67 0.5
200,240 + 13849 mRNA_5481 0.68 1.9
200,559 - 0.5
200,770 + -0.8
201,004 - 0.8
201,244 + 13850 mRNA_5482 0.20 -0.8
201,247 - 13850 mRNA_5482 0.20 0.0
201,716 - 13850 mRNA_5482 0.66 -0.3
201,728 + 13850 mRNA_5482 0.67 1.6
201,858 - 13850 mRNA_5482 0.80 1.1
202,025 + 0.6
202,128 - -0.7
202,269 - 0.9
202,281 + 1.5
202,292 - 0.6
202,408 - 1.0
202,410 + 0.4
202,411 + -1.7
202,413 + 0.7
202,424 + 0.5
202,431 + -0.1
202,585 + -2.3
202,601 - 0.4
202,729 - -1.1
202,739 + -1.4
202,742 - -1.5
202,885 - 0.4
202,903 - 0.6
203,044 - 13851 mRNA_5483 0.15 0.2
203,057 + 13851 mRNA_5483 0.15 1.1