Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5398

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5397: 13765 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 6124 to 7635 13765 mRNA_5398: 13766 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 8077 to 11128 13766 mRNA_5399: 13767 - K07078 K07078 uncharacterized protein, at 11684 to 12574 13767

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
7,150 + 13765 mRNA_5397 0.68 0.2
7,159 - 13765 mRNA_5397 0.68 -0.3
7,227 - 13765 mRNA_5397 0.73 0.9
7,269 - 13765 mRNA_5397 0.76 0.8
7,573 + 1.1
7,590 - 0.5
7,604 + 0.9
7,715 - 0.7
7,742 - -1.6
7,748 + 1.6
7,873 + -0.8
7,877 + 0.4
7,959 + 0.5
7,964 - 1.5
7,976 + 1.5
7,978 + -0.9
7,981 - -0.3
7,993 + 1.6
7,998 + 1.9
8,003 - -0.2
8,159 + -0.6
8,169 + -0.6
8,283 + -1.6
8,392 - 13766 mRNA_5398 0.10 -3.1
8,423 - 13766 mRNA_5398 0.11 -1.0
8,426 + 13766 mRNA_5398 0.11 -1.7
8,429 - 13766 mRNA_5398 0.12 -1.0
8,439 + 13766 mRNA_5398 0.12 -1.7
8,712 + 13766 mRNA_5398 0.21 0.8
8,719 + 13766 mRNA_5398 0.21 0.9
8,861 - 13766 mRNA_5398 0.26 -1.0
8,867 + 13766 mRNA_5398 0.26 0.1
9,115 - 13766 mRNA_5398 0.34 -0.3
9,191 + 13766 mRNA_5398 0.37 -0.5
9,291 + 13766 mRNA_5398 0.40 1.6
9,319 - 13766 mRNA_5398 0.41 -0.4
9,431 + 13766 mRNA_5398 0.44 0.3
9,481 + 13766 mRNA_5398 0.46 0.4
9,575 + 13766 mRNA_5398 0.49 -0.8
9,590 - 13766 mRNA_5398 0.50 0.5
9,591 + 13766 mRNA_5398 0.50 -0.4
9,597 + 13766 mRNA_5398 0.50 -0.8
9,624 + 13766 mRNA_5398 0.51 0.5
9,689 - 13766 mRNA_5398 0.53 0.5
9,886 - 13766 mRNA_5398 0.59 -1.9
10,141 - 13766 mRNA_5398 0.68 -0.3
10,144 + 13766 mRNA_5398 0.68 -0.3
10,274 + 13766 mRNA_5398 0.72 1.1
10,274 + 13766 mRNA_5398 0.72 -2.1
10,295 + 13766 mRNA_5398 0.73 -0.5
10,322 - 13766 mRNA_5398 0.74 -1.3
10,345 - 13766 mRNA_5398 0.74 0.2
10,713 - 13766 mRNA_5398 0.86 0.8
10,749 + 13766 mRNA_5398 0.88 1.0
10,821 + 13766 mRNA_5398 0.90 -1.4
10,853 + 0.4
10,874 + -0.9
10,879 + 1.5
10,972 - 0.8
10,973 + 0.2
11,196 + 0.9
11,200 - -0.4
11,291 - -0.5
11,429 + -0.5
11,435 - -0.5
11,447 + -1.2
11,451 + -0.5
11,466 - -2.1
11,467 + 1.7
11,467 + -0.1
11,472 + -0.9
11,488 + 3.0
11,496 + 0.0
11,641 + 0.2
11,663 + -1.3
11,679 + -1.2
11,681 - 0.1
11,681 + 0.0
11,793 - 13767 mRNA_5399 0.12 -0.1
11,863 - 13767 mRNA_5399 0.20 1.6
11,937 - 13767 mRNA_5399 0.28 -1.8
11,938 - 13767 mRNA_5399 0.29 -1.2