Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5347

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5346: 13714 - HMMPfam-Hamartin protein-PF04388, at 504794 to 508994 13714 mRNA_5347: 13715 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 509884 to 511420 13715

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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508,937 + -0.3
509,071 - 0.2
509,236 - 0.8
509,251 - 0.8
509,387 - -0.7
509,395 - 0.3
509,526 + 1.2
509,529 + -0.9
509,680 + 2.9
509,704 + -0.6
509,820 - -0.4
509,826 + -1.0
509,989 - 0.2
510,002 - -0.3
510,128 + 13715 mRNA_5347 0.16 -0.7
510,298 - 13715 mRNA_5347 0.27 0.2
510,433 + 13715 mRNA_5347 0.36 1.3
510,554 + 13715 mRNA_5347 0.44 -0.2
510,571 - 13715 mRNA_5347 0.45 0.9
510,716 + 13715 mRNA_5347 0.54 -1.1
510,870 - 13715 mRNA_5347 0.64 0.2
510,893 - 13715 mRNA_5347 0.66 0.9
511,040 - 13715 mRNA_5347 0.75 0.2
511,442 - 0.3
511,465 - 0.2
511,628 - 0.9
511,643 + -0.9
511,906 - -2.3
511,914 + 0.4
512,063 + 0.6
512,192 - 0.3
512,359 - -0.1