Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5304

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5303: 13671 - K17608 STRN1_3_4 striatin 1/3/4, at 405190 to 408801 13671 mRNA_5304: 13672 - KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230, at 409088 to 413869 13672 mRNA_5305: 13673 - K14859 SSF1_2 ribosome biogenesis protein SSF1/2, at 414349 to 416763 13673

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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408,182 - 13671 mRNA_5303 0.83 1.2
408,485 + 0.1
408,522 + -1.8
408,525 + 0.3
408,596 + -0.1
408,806 + 0.0
408,881 - 0.2
409,158 - -1.3
409,176 + 0.1
409,330 - 0.3
409,336 + -2.3
409,363 - -0.0
409,682 + 13672 mRNA_5304 0.12 0.2
409,865 - 13672 mRNA_5304 0.16 0.2
409,905 - 13672 mRNA_5304 0.17 1.1
409,919 + 13672 mRNA_5304 0.17 0.2
410,072 + 13672 mRNA_5304 0.21 1.4
410,108 - 13672 mRNA_5304 0.21 -0.2
410,263 + 13672 mRNA_5304 0.25 0.6
410,452 - 13672 mRNA_5304 0.29 0.8
410,544 + 13672 mRNA_5304 0.30 0.8
410,587 - 13672 mRNA_5304 0.31 -1.0
411,333 + 13672 mRNA_5304 0.47 1.1
411,356 - 13672 mRNA_5304 0.47 1.4
411,614 - 13672 mRNA_5304 0.53 -0.9
411,748 + 13672 mRNA_5304 0.56 0.5
412,087 + 13672 mRNA_5304 0.63 -1.5
412,479 - 13672 mRNA_5304 0.71 1.1
412,885 + 13672 mRNA_5304 0.79 0.4
413,378 - 13672 mRNA_5304 0.90 -0.0
413,495 + 0.2
413,645 - 0.7
413,918 + 1.7
413,942 - -0.2
414,232 + -0.1
414,245 - -0.2