Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5082

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5081: 13449 - K10396 KIF5 kinesin family member 5, at 1701702 to 1705465 13449 mRNA_5082: 13450 - K10696 BRE1 E3 ubiquitin-protein ligase BRE1, at 1706172 to 1709244 13450 mRNA_5083: 13451 - Hypothetical Protein, at 1709855 to 1711486 13451

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,705,373 + -1.6
1,705,512 - -0.1
1,705,646 - 0.7
1,705,653 + 0.1
1,705,656 - 0.0
1,705,795 + -0.3
1,705,807 + 0.1
1,705,811 - -1.5
1,705,812 - 1.5
1,706,081 - 0.6
1,706,085 + 2.0
1,706,235 - -1.1
1,706,383 + 0.0
1,707,351 - 13450 mRNA_5082 0.38 -2.3
1,708,360 + 13450 mRNA_5082 0.71 -0.5
1,708,596 + 13450 mRNA_5082 0.79 -0.7
1,709,031 + -2.3
1,709,178 + -0.7
1,709,306 + -0.4
1,709,327 - 0.1
1,709,443 - -0.7
1,709,458 - 1.0
1,709,469 - 0.3
1,709,475 + 0.5
1,709,476 + 0.4
1,709,476 + -0.5
1,709,483 + 0.7
1,709,493 + -0.9
1,709,606 - -0.0
1,709,608 - 0.1
1,709,609 - -0.1
1,709,615 + 0.8
1,709,756 - 0.2
1,709,901 - -0.3
1,709,924 + 0.4