Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5048

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5047: 13415 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1631648 to 1632435 13415 mRNA_5048: 13416 - HMMPfam-Animal haem peroxidase-PF03098,ProSiteProfiles-Animal heme peroxidase superfamily profile.-PS50292,SUPERFAMILY--SSF48113, at 1632775 to 1633418 13416 mRNA_5049: 13417 - HMMPfam-Cytochrome P450-PF00067,SUPERFAMILY--SSF48264, at 1633611 to 1634725 13417

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,631,903 + 13415 mRNA_5047 0.32 1.2
1,632,007 - 13415 mRNA_5047 0.46 1.3
1,632,217 - 13415 mRNA_5047 0.72 0.6
1,632,339 - 13415 mRNA_5047 0.88 0.3
1,632,346 - 13415 mRNA_5047 0.89 -0.7
1,632,366 + -0.1
1,632,367 - -0.3
1,632,383 + -0.2
1,632,395 - -0.9
1,632,426 - 0.4
1,632,476 - 0.1
1,632,567 - -1.6
1,632,579 - -0.8
1,632,591 + -0.6
1,632,815 - 2.0
1,632,848 - 13416 mRNA_5048 0.11 3.6
1,632,932 - 13416 mRNA_5048 0.24 -0.8
1,633,130 + 13416 mRNA_5048 0.55 1.8
1,633,371 - -0.2