Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4887

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4886: 13254 - Hypothetical Protein, at 1220843 to 1222544 13254 mRNA_4887: 13255 - K11365 SGF73 SAGA-associated factor 73, at 1222700 to 1223919 13255 mRNA_4888: 13256 - K20044 PICALM phosphatidylinositol-binding clathrin assembly protein, at 1224614 to 1227335 13256

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,222,111 + 13254 mRNA_4886 0.75 -2.1
1,222,118 - 13254 mRNA_4886 0.75 0.4
1,222,386 + -0.8
1,222,697 + 0.5
1,222,839 - 13255 mRNA_4887 0.11 -0.1
1,222,870 - 13255 mRNA_4887 0.14 -0.1
1,222,876 + 13255 mRNA_4887 0.14 0.2
1,223,032 + 13255 mRNA_4887 0.27 1.0
1,223,118 - 13255 mRNA_4887 0.34 0.8
1,223,452 + 13255 mRNA_4887 0.62 -0.7
1,223,589 + 13255 mRNA_4887 0.73 1.2
1,223,732 + 13255 mRNA_4887 0.85 -0.4
1,224,167 + -0.1
1,224,168 - 0.0
1,224,169 - 0.8
1,224,178 - 0.4
1,224,188 - -1.0
1,224,192 + -0.2
1,224,194 - -0.1
1,224,201 + -0.1
1,224,201 + 0.8
1,224,202 - 0.5
1,224,203 - 2.0
1,224,203 - 0.0
1,224,325 + 0.2
1,224,329 + -0.1
1,224,340 + 0.3
1,224,385 + -0.1
1,224,464 - -0.8
1,224,478 + 0.6
1,224,480 + -0.4
1,224,481 - -0.9
1,224,492 + 0.7