Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4874

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4873: 13241 - K09205 KLF8_12 krueppel-like factor 8/12, at 1191308 to 1191654 13241 mRNA_4874: 13242 - KOG2922 Uncharacterized conserved protein, at 1192452 to 1195364 13242 mRNA_4875: 13243 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1195483 to 1197426 13243

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,191,902 + 2.7
1,191,925 - 0.1
1,192,019 + -0.6
1,192,089 - 0.2
1,192,094 + -0.7
1,192,208 - -1.0
1,192,211 - 0.1
1,192,236 - 0.5
1,192,238 + -0.3
1,192,246 - -0.8
1,192,357 - -1.6
1,192,377 + 0.5
1,192,520 + 0.2
1,192,531 - -1.5
1,193,645 - 13242 mRNA_4874 0.41 1.0
1,194,700 - 13242 mRNA_4874 0.77 1.6
1,195,141 + 0.3
1,195,308 - -0.1
1,195,325 + 0.6
1,195,326 + 0.1
1,196,199 + 13243 mRNA_4875 0.37 -1.1
1,196,201 + 13243 mRNA_4875 0.37 -0.2