Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4500

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4499: 12867 - K01968 E6.4.1.4A 3-methylcrotonyl-CoA carboxylase alpha subunit, at 323884 to 327513 12867 mRNA_4500: 12868 - K14304 NUP85 nuclear pore complex protein Nup85, at 327724 to 330564 12868 mRNA_4501: 12869 - Hypothetical Protein, at 330737 to 332545 12869

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
327,285 - 1.9
327,422 + 0.3
327,434 - 1.6
327,437 + 0.5
327,447 + 0.6
327,674 + 0.3
327,798 - -0.9
328,363 - 12868 mRNA_4500 0.22 -1.1
328,485 - 12868 mRNA_4500 0.27 -0.9
328,649 + 12868 mRNA_4500 0.33 0.3
329,114 + 12868 mRNA_4500 0.49 0.7
329,220 - 12868 mRNA_4500 0.53 2.1
329,291 - 12868 mRNA_4500 0.55 -0.6
329,505 + 12868 mRNA_4500 0.63 -0.2
329,512 + 12868 mRNA_4500 0.63 0.1
329,557 - 12868 mRNA_4500 0.65 0.9
329,729 - 12868 mRNA_4500 0.71 0.2
329,780 - 12868 mRNA_4500 0.72 -1.0
329,795 - 12868 mRNA_4500 0.73 1.1
330,197 - 12868 mRNA_4500 0.87 0.2
330,361 + 1.3
330,364 - -0.2
330,476 - 0.2
330,512 + 0.1
330,523 + 0.1
330,644 + 0.7
330,655 - -0.0
330,674 + 0.2
331,045 + 12869 mRNA_4501 0.17 -0.9
331,223 - 12869 mRNA_4501 0.27 -0.7