Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4403

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97723 to 98507 12769 mRNA_4402: 12770 - Hypothetical Protein, at 98627 to 98893 12770 mRNA_4403: 12771 - Hypothetical Protein, at 99143 to 102687 12771 mRNA_4404: 12772 - HMMPfam-Fatty acid hydroxylase superfamily-PF04116, at 103053 to 104397 12772

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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98,550 - 2.2
98,662 + 12770 mRNA_4402 0.13 -0.3
98,697 + 12770 mRNA_4402 0.26 0.0
98,697 + 12770 mRNA_4402 0.26 -0.1
98,709 + 12770 mRNA_4402 0.31 -0.0
98,836 - 12770 mRNA_4402 0.78 -0.4
98,981 - -1.0
99,140 - 0.6
99,145 - -0.1
99,146 - 1.5
99,157 + 1.2
99,169 + -1.4
99,185 + 0.5
99,200 + -0.1
99,266 + 0.0
99,268 + -2.1
99,276 + 0.5
99,310 + 2.0
99,335 + -0.9
99,444 - -0.5
99,465 - 0.8
99,475 - 0.8
99,480 + 0.6
99,632 - 12771 mRNA_4403 0.14 2.3
100,029 - 12771 mRNA_4403 0.25 0.6
100,367 - 12771 mRNA_4403 0.35 0.8
100,438 - 12771 mRNA_4403 0.37 -0.3
100,485 + 12771 mRNA_4403 0.38 0.4
101,002 - 12771 mRNA_4403 0.52 -0.1
101,079 + 12771 mRNA_4403 0.55 0.3
101,117 + 12771 mRNA_4403 0.56 1.5
101,217 + 12771 mRNA_4403 0.59 1.0
101,301 + 12771 mRNA_4403 0.61 0.7
101,518 - 12771 mRNA_4403 0.67 -0.4
101,829 + 12771 mRNA_4403 0.76 -0.5
102,101 + 12771 mRNA_4403 0.83 -1.4
102,104 + 12771 mRNA_4403 0.84 0.4
102,122 - 12771 mRNA_4403 0.84 -0.3
102,276 - 12771 mRNA_4403 0.88 1.4
102,340 + -0.8
102,417 + -0.7
102,422 + 1.1
102,580 + 0.3
102,706 + 0.1
102,996 + -0.4
103,171 + -0.4
103,176 - 0.0
103,649 + 12772 mRNA_4404 0.44 -0.1
103,649 + 12772 mRNA_4404 0.44 -1.4