Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4312

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4311: 12679 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1871277 to 1872200 12679 mRNA_4312: 12680 - K14802 DRS2, ATP8A phospholipid-transporting ATPase, at 1872591 to 1877235 12680

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,871,611 + 12679 mRNA_4311 0.36 1.3
1,871,676 + 12679 mRNA_4311 0.43 -0.4
1,871,813 - 12679 mRNA_4311 0.58 1.2
1,871,853 - 12679 mRNA_4311 0.62 -0.7
1,871,867 - 12679 mRNA_4311 0.64 0.5
1,871,966 - 12679 mRNA_4311 0.75 1.3
1,872,127 + 0.9
1,872,223 - -0.1
1,872,223 - -0.8
1,872,277 - 0.6
1,872,314 + 1.5
1,872,421 + 0.2
1,872,573 - -0.5
1,872,647 - 0.7
1,872,885 + -0.2
1,872,920 + 1.7
1,873,047 + 1.9
1,873,143 - 12680 mRNA_4312 0.12 3.0
1,873,444 - 12680 mRNA_4312 0.18 0.8
1,873,640 - 12680 mRNA_4312 0.23 1.3
1,873,801 + 12680 mRNA_4312 0.26 1.4
1,873,864 + 12680 mRNA_4312 0.27 0.7
1,873,941 + 12680 mRNA_4312 0.29 2.1
1,874,358 + 12680 mRNA_4312 0.38 1.3
1,874,681 + 12680 mRNA_4312 0.45 0.3
1,874,803 + 12680 mRNA_4312 0.48 -0.1
1,874,945 - 12680 mRNA_4312 0.51 0.8
1,875,007 - 12680 mRNA_4312 0.52 2.4
1,875,367 + 12680 mRNA_4312 0.60 0.4
1,875,383 + 12680 mRNA_4312 0.60 2.1
1,875,658 - 12680 mRNA_4312 0.66 0.4
1,875,810 - 12680 mRNA_4312 0.69 0.4
1,875,815 + 12680 mRNA_4312 0.69 1.1
1,875,840 + 12680 mRNA_4312 0.70 0.6
1,875,843 - 12680 mRNA_4312 0.70 0.9
1,875,860 + 12680 mRNA_4312 0.70 0.5
1,876,226 + 12680 mRNA_4312 0.78 1.4
1,876,381 + 12680 mRNA_4312 0.82 0.1
1,876,726 + 12680 mRNA_4312 0.89 0.8
1,877,063 + 0.7
1,877,189 + 0.7
1,877,670 + 2.4
1,877,674 + 1.6
1,877,676 - 0.9
1,877,810 - -0.7
1,877,816 + 1.9
1,877,819 - 0.5
1,877,971 + 0.3
1,877,980 - 0.7
1,877,984 + -0.1
1,877,987 - -0.8
1,878,097 + -0.2
1,878,114 - 1.9
1,878,114 - 0.8
1,878,114 - 1.9
1,878,118 - -0.4
1,878,141 - -1.1
1,878,145 + 0.8