Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4243

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4242: 12610 - K02985 RP-S3e, RPS3 small subunit ribosomal protein S3e, at 1696957 to 1698115 12610 mRNA_4243: 12611 - HMMPfam-F-box-like-PF12937, at 1698723 to 1700079 12611 mRNA_4244: 12612 - Hypothetical Protein, at 1700194 to 1701109 12612

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,698,641 - -0.2
1,698,648 - 1.0
1,698,658 + 0.5
1,698,661 - 0.2
1,698,696 - 2.3
1,698,829 + 0.3
1,698,989 + 12611 mRNA_4243 0.20 -0.4
1,699,257 + 12611 mRNA_4243 0.39 0.4
1,699,285 - 12611 mRNA_4243 0.41 -0.3
1,699,440 - 12611 mRNA_4243 0.53 -0.0
1,699,551 - 12611 mRNA_4243 0.61 0.1
1,700,114 + -0.3
1,700,131 + -0.1
1,700,154 + -0.4
1,700,407 + 12612 mRNA_4244 0.23 1.2
1,700,527 - 12612 mRNA_4244 0.36 -0.3
1,700,549 - 12612 mRNA_4244 0.39 -0.3
1,700,565 + 12612 mRNA_4244 0.41 -0.3
1,700,588 - 12612 mRNA_4244 0.43 -0.4
1,700,733 + 12612 mRNA_4244 0.59 1.4
1,700,860 + 12612 mRNA_4244 0.73 -0.7