Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4171

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1524974 to 1527080 12538 mRNA_4171: 12539 - KOG2806 Chitinase, at 1528014 to 1529581 12539 mRNA_4172: 12540 - KOG1212 Amidases, at 1530143 to 1531631 12540

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,527,025 + 0.5
1,527,292 - 2.0
1,527,298 + 1.7
1,527,365 - 0.8
1,527,450 - -0.8
1,527,579 - 0.9
1,527,643 + -1.9
1,527,708 + 0.7
1,528,184 + 12539 mRNA_4171 0.11 -0.6
1,528,318 - 12539 mRNA_4171 0.19 0.3
1,528,561 + 12539 mRNA_4171 0.35 -0.3
1,528,768 - 12539 mRNA_4171 0.48 -2.8
1,529,407 - 12539 mRNA_4171 0.89 -0.8
1,529,679 - 1.1