Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4167

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4166: 12534 - K12597 AIR1_2 protein AIR1/2, at 1515878 to 1517607 12534 mRNA_4167: 12535 - Hypothetical Protein, at 1518124 to 1518875 12535 mRNA_4168: 12536 - K09487 HSP90B, TRA1 heat shock protein 90kDa beta, at 1519287 to 1521954 12536

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,517,371 - 12534 mRNA_4166 0.86 0.5
1,517,653 + -0.0
1,517,967 + -0.0
1,517,988 + 0.2
1,518,080 - 0.9
1,518,087 - -0.5
1,518,090 - -0.0
1,518,098 + 2.2
1,518,099 + 1.2
1,518,105 + 0.3
1,518,107 + -0.1
1,518,236 - 12535 mRNA_4167 0.15 -0.7
1,518,237 + 12535 mRNA_4167 0.15 -0.7
1,518,251 - 12535 mRNA_4167 0.17 0.2
1,518,253 + 12535 mRNA_4167 0.17 1.3
1,518,254 + 12535 mRNA_4167 0.17 -0.7
1,518,257 - 12535 mRNA_4167 0.18 0.0
1,518,258 + 12535 mRNA_4167 0.18 -1.5
1,518,406 - 12535 mRNA_4167 0.38 0.4
1,518,424 - 12535 mRNA_4167 0.40 0.4
1,518,558 - 12535 mRNA_4167 0.58 -0.6
1,518,690 + 12535 mRNA_4167 0.75 -0.6
1,518,692 + 12535 mRNA_4167 0.76 1.2
1,518,696 + 12535 mRNA_4167 0.76 -1.8
1,518,956 + -0.4
1,518,958 - 0.7
1,518,962 - 1.9
1,518,966 + -1.6
1,518,967 + 0.3
1,518,975 - -0.4
1,518,985 - 1.0
1,518,992 + -0.7
1,519,013 + 0.8
1,519,034 - 0.4
1,519,041 - -0.2
1,519,426 + -0.6
1,519,618 + 12536 mRNA_4168 0.12 0.3
1,519,738 + 12536 mRNA_4168 0.17 -0.4