Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4108

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4106: 12474 - HMMPfam-L-lysine 6-monooxygenase (NADPH-requiring)-PF13434,SUPERFAMILY--SSF51905, at 1370124 to 1372356 12474 mRNA_4107: 12475 - K00621 GNPNAT1, GNA1 glucosamine-phosphate N-acetyltransferase, at 1372568 to 1373212 12475 mRNA_4108: 12476 - HMMPfam-Aminotransferase class IV-PF01063,SUPERFAMILY--SSF56752, at 1373354 to 1374334 12476 mRNA_4109: 12477 - Hypothetical Protein, at 1374753 to 1375099 12477

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,372,499 - -0.3
1,373,425 - -0.8
1,373,535 + 12476 mRNA_4108 0.18 0.6
1,374,084 + 12476 mRNA_4108 0.74 0.8
1,374,158 - 12476 mRNA_4108 0.82 1.0
1,374,160 + 12476 mRNA_4108 0.82 1.4
1,374,426 - -0.6
1,374,563 + 0.9
1,374,739 + 0.5
1,374,890 + 12477 mRNA_4109 0.39 0.4
1,375,003 + 12477 mRNA_4109 0.72 -2.2
1,375,033 + 12477 mRNA_4109 0.81 1.3