Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3821

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3820: 12188 - K20046 SLA1 actin cytoskeleton-regulatory complex protein SLA1, at 660836 to 665185 12188 mRNA_3821: 12189 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 665422 to 669105 12189 mRNA_3822: 12190 - HMMPfam-Protein of unknown function (DUF2781)-PF10914,PIRSF--PIRSF031032, at 669228 to 670038 12190

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
665,064 - 2.8
665,067 - 0.2
665,193 - -0.1
665,268 - 0.3
665,321 + 0.1
665,329 + -0.8
665,680 - 0.1
665,829 + 12189 mRNA_3821 0.11 -0.1
665,956 + 12189 mRNA_3821 0.14 -0.2
666,082 - 12189 mRNA_3821 0.18 0.9
666,148 + 12189 mRNA_3821 0.20 0.5
666,539 + 12189 mRNA_3821 0.30 -0.2
666,608 + 12189 mRNA_3821 0.32 -0.2
667,153 - 12189 mRNA_3821 0.47 -0.5
667,388 + 12189 mRNA_3821 0.53 0.0
667,570 + 12189 mRNA_3821 0.58 -1.5
667,906 + 12189 mRNA_3821 0.67 -2.0
668,372 + 12189 mRNA_3821 0.80 -0.3
668,374 + 12189 mRNA_3821 0.80 1.5
668,474 + 12189 mRNA_3821 0.83 -0.7
668,554 - 12189 mRNA_3821 0.85 -1.0
668,713 + 12189 mRNA_3821 0.89 -0.3
668,863 + -0.7
668,988 - 1.4
669,009 - 0.2
669,050 + -0.5
669,176 + -0.1
669,178 - 0.4
669,187 - -0.8
669,188 - 0.5
669,197 - -0.8
669,289 + -1.3
669,945 + 12190 mRNA_3822 0.88 0.0
669,993 - 0.3