Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3606

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3605: 11973 - K01872 AARS, alaS alanyl-tRNA synthetase, at 154792 to 158003 11973 mRNA_3606: 11974 - HMMPfam-Tho complex subunit 7-PF05615, at 158142 to 159312 11974 mRNA_3607: 11975 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 159428 to 160353 11975

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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158,041 - -0.5
158,141 + 0.6
158,176 - -0.2
158,573 - 11974 mRNA_3606 0.37 -0.2
158,579 - 11974 mRNA_3606 0.37 -0.9
158,919 - 11974 mRNA_3606 0.66 0.4
159,068 - 11974 mRNA_3606 0.79 0.6
159,341 - 0.0
159,349 - 1.0
159,350 + -1.2
159,385 + -0.0
159,619 - 11975 mRNA_3607 0.21 1.5
159,638 - 11975 mRNA_3607 0.23 -0.9
159,660 - 11975 mRNA_3607 0.25 -1.0
159,663 - 11975 mRNA_3607 0.25 1.3
159,930 - 11975 mRNA_3607 0.54 0.8
159,960 + 11975 mRNA_3607 0.57 0.6
160,202 + 11975 mRNA_3607 0.84 -0.7
160,222 + 11975 mRNA_3607 0.86 -0.5