Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3593

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123173 to 125228 11960 mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125373 to 127423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127609 to 129068 11962

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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125,281 + -0.8
125,288 + 0.6
125,453 + -0.4
125,701 - 11961 mRNA_3593 0.16 -0.6
125,915 + 11961 mRNA_3593 0.26 2.4
126,145 + 11961 mRNA_3593 0.38 -0.5
126,312 - 11961 mRNA_3593 0.46 0.4
126,329 + 11961 mRNA_3593 0.47 -1.3
126,345 + 11961 mRNA_3593 0.47 -0.9
127,200 - 11961 mRNA_3593 0.89 0.9
127,201 + 11961 mRNA_3593 0.89 0.4
127,205 + 11961 mRNA_3593 0.89 0.6
127,342 - -0.2
127,366 + -0.3
127,372 + 0.2
127,375 - -0.9
127,483 + -0.0
127,486 + -0.5
127,487 - -0.6
127,504 - -1.9
127,523 - -0.2
127,527 - 0.5
127,653 - 0.1
127,681 + -2.1
127,692 - 0.3
127,720 + -1.1
127,835 + 11962 mRNA_3594 0.15 -0.8
127,989 + 11962 mRNA_3594 0.26 0.3
128,247 - 11962 mRNA_3594 0.44 0.1
128,271 + 11962 mRNA_3594 0.45 1.2