Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3589

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113212 to 115744 11956 mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116230 to 117801 11957

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
115,790 - -0.7
116,215 + -1.5
116,230 - -0.1
116,234 + -0.4
116,372 + -0.0
117,133 + 11957 mRNA_3589 0.57 -0.9
117,270 + 11957 mRNA_3589 0.66 0.2
117,308 - 11957 mRNA_3589 0.69 0.5
117,377 - 11957 mRNA_3589 0.73 -0.9
117,448 - 11957 mRNA_3589 0.77 0.0
117,686 - 0.2
117,689 + 1.3
117,693 - -0.4
117,838 + -0.4
117,855 + -1.0
118,129 - 1.8
118,140 + 0.0
118,261 + 0.3
118,287 + -0.6
118,420 + 0.7
118,570 + -0.4
118,732 - -1.3
118,736 + 2.0
118,743 + -0.8
118,745 - -0.9
118,746 - 0.1
118,746 + 0.1
118,747 - -0.3
118,749 + 0.5
118,753 - 0.0
118,753 + -0.2