Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3562

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59099 to 59542 11930

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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58,154 + 0.3
58,311 - -0.4
58,643 + 0.6
58,780 - 0.8
58,870 + 0.3
58,911 - -0.4
58,917 + 1.3
59,096 + 0.6
59,424 - 11930 mRNA_3562 0.73 -0.3
59,522 - -0.9
59,824 - 1.6
59,825 + -1.0
59,956 + 2.4
59,957 - -0.6
60,097 + -0.5
60,098 - -0.1
60,117 + -0.7
60,254 + 0.4
60,260 - -0.3
60,270 + 1.2
60,306 + -0.3
60,394 + -1.2
60,399 + 0.0
60,406 - 1.1
60,413 + 0.4
60,424 + 0.8
60,437 - -0.2