Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3444

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3443: 11811 - K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10, at 116448 to 118253 11811 mRNA_3444: 11812 - Hypothetical Protein, at 118476 to 119519 11812 mRNA_3445: 11813 - HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041, at 120363 to 121884 11813

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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117,818 + 11811 mRNA_3443 0.76 0.2
118,094 - 0.1
118,108 + -0.1
118,241 + 0.6
118,587 + 11812 mRNA_3444 0.11 1.2
118,691 + 11812 mRNA_3444 0.21 0.4
118,817 + 11812 mRNA_3444 0.33 -1.0
118,832 - 11812 mRNA_3444 0.34 1.0
119,125 - 11812 mRNA_3444 0.62 -0.2
119,154 - 11812 mRNA_3444 0.65 1.3
119,578 - -1.1
119,579 + 0.4
119,601 + -0.2
119,736 + -0.4
119,904 - -0.5
120,034 - 0.5