Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3441

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110002 to 112287 11808 mRNA_3441: 11809 - K00729 ALG5 dolichyl-phosphate beta-glucosyltransferase, at 112497 to 113807 11809 mRNA_3442: 11810 - SUPERFAMILY--SSF52047, at 113931 to 115281 11810

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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111,549 + 11808 mRNA_3440 0.68 -0.3
111,565 + 11808 mRNA_3440 0.68 1.0
111,650 + 11808 mRNA_3440 0.72 0.4
111,726 + 11808 mRNA_3440 0.75 -0.8
111,956 - 11808 mRNA_3440 0.85 0.3
111,964 + 11808 mRNA_3440 0.86 1.7
112,142 + 1.6
112,145 + -0.1
112,151 - -0.2
112,268 - -0.6
112,278 - -1.3
112,406 - -0.2
112,409 + 0.8
112,416 - 1.1
112,429 + -1.1
112,546 - -0.1
112,548 - 0.6
112,559 - 0.7
112,567 - 0.6
112,823 - 11809 mRNA_3441 0.25 -0.1
112,839 + 11809 mRNA_3441 0.26 0.8
112,856 + 11809 mRNA_3441 0.27 0.0
112,878 + 11809 mRNA_3441 0.29 -0.6
112,884 + 11809 mRNA_3441 0.30 0.2
113,125 - 11809 mRNA_3441 0.48 -0.1
113,129 + 11809 mRNA_3441 0.48 0.9
113,133 - 11809 mRNA_3441 0.49 0.8
113,178 - 11809 mRNA_3441 0.52 -0.2
113,477 - 11809 mRNA_3441 0.75 0.5
113,575 - 11809 mRNA_3441 0.82 -0.3
113,685 + -0.0
113,758 + 0.5
113,909 - 0.5
114,035 + -0.4
114,175 + 11810 mRNA_3442 0.18 -1.3
114,180 - 11810 mRNA_3442 0.18 -0.4
114,182 - 11810 mRNA_3442 0.19 0.6
114,340 - 11810 mRNA_3442 0.30 0.0
114,568 + 11810 mRNA_3442 0.47 0.4