Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3376

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3375: 11743 - Hypothetical Protein, at 528388 to 528831 11743 mRNA_3376: 11744 - K12864 CTNNBL1 beta-catenin-like protein 1, at 528897 to 531251 11744 mRNA_3377: 11745 - KOG1516 Carboxylesterase and related proteins, at 531386 to 533428 11745

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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527,922 + -0.0
527,997 + 0.7
528,021 - 1.3
528,022 - -0.1
528,038 + -0.1
528,061 + 0.3
528,071 - -1.4
528,091 + 1.0
528,091 - 2.0
528,182 - -0.2
528,236 + -0.0
528,359 - -1.2
528,401 + 1.1
528,486 - 11743 mRNA_3375 0.22 -0.4
528,667 + 11743 mRNA_3375 0.63 0.8
528,845 + 0.7
528,846 + 0.3
529,000 + -0.1
529,055 - -2.2
529,187 - 11744 mRNA_3376 0.12 1.0
529,243 + 11744 mRNA_3376 0.15 -0.6
529,265 - 11744 mRNA_3376 0.16 0.9
529,386 + 11744 mRNA_3376 0.21 0.4
529,556 - 11744 mRNA_3376 0.28 0.6
529,789 - 11744 mRNA_3376 0.38 -1.0
529,808 - 11744 mRNA_3376 0.39 -1.3
530,033 + 11744 mRNA_3376 0.48 0.6
530,034 - 11744 mRNA_3376 0.48 0.9
530,063 - 11744 mRNA_3376 0.50 -0.1
530,150 - 11744 mRNA_3376 0.53 2.2
530,173 - 11744 mRNA_3376 0.54 0.3
530,191 - 11744 mRNA_3376 0.55 -0.4
530,280 + 11744 mRNA_3376 0.59 -0.1
530,412 + 11744 mRNA_3376 0.64 -0.3
530,414 - 11744 mRNA_3376 0.64 1.0
530,419 + 11744 mRNA_3376 0.65 1.5
530,439 - 11744 mRNA_3376 0.65 1.5
530,569 + 11744 mRNA_3376 0.71 -0.4
530,694 - 11744 mRNA_3376 0.76 0.0
530,736 + 11744 mRNA_3376 0.78 1.3
531,106 - -1.5
531,285 + -0.6
531,286 - 0.5
531,481 - -0.2
531,553 - 0.1
531,598 - 11745 mRNA_3377 0.10 0.9
531,687 + 11745 mRNA_3377 0.15 0.2
531,911 + 11745 mRNA_3377 0.26 0.9
532,134 + 11745 mRNA_3377 0.37 -0.1